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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112180248_112180471_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112180248 - 112180471

Intron Length:

224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGATGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTGGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAC

U12 Branch Point Sequence:

AACGTAGTAACT

Flanking Amino Acid:

VTLKGYFIPKGTYVIPLLTS

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.8

34.3

Major BPS

66.7

0.42

1.2

67.6

36.5

Major PPT

76.1

0.59

0.9

68.6

37.3

Minor 5ss

32.8

-2

41.8

Minor BPS

43.4

-0.4

2.2

59.85

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015676

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016353

112179082 - 112187462

8381