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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11225808_11225911_R

Intron Information:

Intron Rank:

130230

Intron Class:

major

Intron Phase:

Intron Coordinates:

11225808 - 11225911

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTAT

5'SS Class:

strong_major

3'SS Sequence:

ATGTTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGCCTTTTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

85.7

25.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.1

0.77

0.8

81.6

35.5

Minor 5ss

-0.2

2.5

66.4

45.1

Minor BPS

57.7

0.1

1.3

56.54

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017266

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021906

11223244 - 11225943

2700