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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112265230_112267295_F

Intron Information:

Intron Rank:

139543

Intron Class:

major

Intron Phase:

Intron Coordinates:

112265230 - 112267295

Intron Length:

2066

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

GCTTACTGCACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.6

37.4

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

89.9

0.9

0.7

84.7

30.1

Minor 5ss

38.4

-1.3

3.1

47.7

42.5

Minor BPS

45.9

-0.4

2.1

54.08

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019628

112265108 - 112268270

3163