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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112265648_112267295_F

Intron Information:

Intron Rank:

139544

Intron Class:

major

Intron Phase:

Intron Coordinates:

112265648 - 112267295

Intron Length:

1648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

GCTTACTGCACG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

72.4

38.6

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

89.9

0.9

0.7

84.7

30.1

Minor 5ss

41.3

-1

2.5

48.1

42.7

Minor BPS

45.9

-0.4

2.1

54.08

46.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025033

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045760

112265584 - 112268270

2687