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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112277941_112278277_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
112277941 - 112278277

Intron Length:
337

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGATAT

5'SS Class:
strong_major

3'SS Sequence:
TCTCATCCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCAT

U12 Branch Point Sequence:
AACTGCCTAACA

Flanking Amino Acid:
AAVLSPSTGQDLSYVPLPLL

Intron Amino Acid Position:
80

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.2
0.78
1
77.7
33.3

Major BPS
94.9
1.12
0.6
93.9
14.7

Major PPT
75.2
0.57
0.8
68.7
31.4

Minor 5ss
38.2
-1.3
3.4
55.2
49

Minor BPS
49.8
-0
2.1
63.75
42.3

Associated Gene:

Gene:
CRISP3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

112270605 - 112281677
11073