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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11230778_11233495_R

Intron Information:

Intron Rank:

144385

Intron Class:

major

Intron Phase:

Intron Coordinates:

11230778 - 11233495

Intron Length:

2718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AACTCTTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

75.1

35.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

82.1

0.72

0.8

76.4

32.3

Minor 5ss

31.7

-2.1

3.4

46.2

Minor BPS

71.1

0.64

1.2

69.54

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024966

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031684

11228347 - 11233573

5227