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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11234912_11236771_R

Intron Information:

Intron Rank:

135264

Intron Class:

major

Intron Phase:

Intron Coordinates:

11234912 - 11236771

Intron Length:

1860

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTTTTAAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.6

32.8

Major BPS

90.4

0.7

90.2

19.3

Major PPT

88.6

0.87

0.6

87.8

22.3

Minor 5ss

37.5

-1.4

3.2

47.2

Minor BPS

69.4

0.6

1.3

77.65

32.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031265

11233594 - 11239215

5622