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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112374731_112401353_F

Intron Information:

Intron Rank:

129847

Intron Class:

major

Intron Phase:

Intron Coordinates:

112374731 - 112401353

Intron Length:

26623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAA

U12 Branch Point Sequence:

TTCCTTTTTACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

77.9

36.9

Major BPS

65.3

0.38

71.6

30.1

Major PPT

91.2

0.93

0.6

86.8

24.1

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

56.6

0.2

1.6

67.83

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040339

112373828 - 112401540

27713