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Intron Name: Anas_platyrhynchos_platyrhynchos_3_11270144_11270529_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11270144 - 11270529

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CAGTTTTTAAAA

Flanking Amino Acid:

LGYIGNLQEKVPELAGFWLL

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

80.1

28.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

77.5

0.62

0.9

33.3

Minor 5ss

46.6

-0.3

2.5

60.6

44.5

Minor BPS

58.1

0.25

1.4

60.79

39.5

Associated Gene:

Gene:

TMEM17

Ensembl Gene ID:

ENSAPLG00000006949

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007204

11266588 - 11270793

4206