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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112701817_112712758_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112701817 - 112712758

Intron Length:

10942

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CCATCTCTAACA

Flanking Amino Acid:

LNGQGGVIRRGGTCVVNPTD

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

94.8

1.01

0.5

92.6

17.3

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

57.4

0.23

1.7

64.46

42.1

Associated Gene:

Gene:

TFAP2D

Ensembl Gene ID:

ENSAPLG00000014639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036087

112697349 - 112746000

48652

ENSAPLT00000034502

112697610 - 112746000

48391

ENSAPLT00000015264

112696838 - 112746000

49163