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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112712925_112715656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112712925 - 112715656

Intron Length:

2732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

TCTTCTACATTT

Flanking Amino Acid:

NASLLGGILRRAKSKNGGRC

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.3

17.5

Major BPS

70.2

0.5

1.1

77.2

Major PPT

0.65

0.9

75.8

32.8

Minor 5ss

39.5

-1.2

2.8

47.2

Minor BPS

46.6

-0.1

68.65

42.9

Associated Gene:

Gene:

TFAP2D

Ensembl Gene ID:

ENSAPLG00000014639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034502

112697610 - 112746000

48391

ENSAPLT00000015264

112696838 - 112746000

49163

ENSAPLT00000036087

112697349 - 112746000

48652