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Intron Name: Anas_platyrhynchos_platyrhynchos_3_112782101_112790016_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

112782101 - 112790016

Intron Length:

7916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGATT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATGAT

U12 Branch Point Sequence:

TTTTCTTTCTCC

Flanking Amino Acid:

NLLDQSVIKKVPVPPKSVTS

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

84.2

33.4

Major BPS

63.3

0.33

1.1

53.7

41.6

Major PPT

91.6

0.94

0.6

84.9

29.9

Minor 5ss

44.3

-0.6

3.2

65.5

45.8

Minor BPS

46.6

-0.2

3.6

77.75

38.7

Associated Gene:

Gene:

TFAP2B

Ensembl Gene ID:

ENSAPLG00000013905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014542

112771981 - 112797836

25856