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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113262618_113266380_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113262618 - 113266380

Intron Length:

3763

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATCC

5'SS Class:

strong_major

3'SS Sequence:

TTTAAATTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

ACTGCTTTAAAT

Flanking Amino Acid:

NLVFTVTSPPGAKFTVLSHP

Intron Amino Acid Position:

3529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.5

36.3

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

77.3

0.61

0.9

40.2

Minor 5ss

37.8

-1.4

3.3

51.1

45.6

Minor BPS

0.52

1.5

75.14

41.9

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866