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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113272755_113283324_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

113272755 - 113283324

Intron Length:

10570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

AAAAAAATGGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

GTTTGTTTACAT

Flanking Amino Acid:

DFLSPGGDNSSRQHPGTWLY

Intron Amino Acid Position:

3421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.8

76.2

39.9

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

-0.3

1.2

32.5

39.1

Minor 5ss

32.1

-2

3.1

40.6

45.6

Minor BPS

49.5

0.04

2.1

73.53

43.4

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866