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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113284319_113321941_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113284319 - 113321941

Intron Length:

37623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTCTCCCCACCT

Flanking Amino Acid:

FEWTQFYLQAGIYRDDKKCI

Intron Amino Acid Position:

3090

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

34.9

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.4

0.73

0.8

73.4

37.1

Minor 5ss

34.1

-1.8

3.1

41.9

38.9

Minor BPS

46.8

-0.1

2.2

68.62

47.8

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866