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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113325907_113326804_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113325907 - 113326804

Intron Length:

898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTCTT

5'SS Class:

major

3'SS Sequence:

TAATCTCTGGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTTTTAATC

Flanking Amino Acid:

PKVLGLMKLKDVTFTGFTKS

Intron Amino Acid Position:

2982

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.2

73.9

42.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.36

62.8

Minor 5ss

35.1

-1.7

3.2

50.3

Minor BPS

74.8

0.76

1.1

33.7

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866