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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113328208_113330199_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113328208 - 113330199

Intron Length:

1992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TGAAACTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAC

U12 Branch Point Sequence:

GTCTCTTGAAAC

Flanking Amino Acid:

LHERLLHRHIGHFHDTEDSR

Intron Amino Acid Position:

2638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

76.9

31.6

Major BPS

78.3

0.7

32.1

Major PPT

61.9

0.27

51.2

43.2

Minor 5ss

33.9

-1.8

2.9

40.8

39.5

Minor BPS

57.6

0.22

1.6

65.31

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866