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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113334315_113335335_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113334315 - 113335335

Intron Length:

1021

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGAGAC

5'SS Class:

major

3'SS Sequence:

TCTGTTTTGGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATTTCTCTAATT

Flanking Amino Acid:

EEINVHPGSIGVYGKVQIYS

Intron Amino Acid Position:

2557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

63.9

34.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

67.3

0.39

1.2

70.9

38.9

Minor 5ss

-1.5

3.3

46.5

43.6

Minor BPS

70.5

0.72

1.6

32.2

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866