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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113352944_113356870_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113352944 - 113356870

Intron Length:

3927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGGAAG

5'SS Class:

major

3'SS Sequence:

TGTAGTCCCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGCAC

U12 Branch Point Sequence:

AGTTCTGCACTG

Flanking Amino Acid:

GPGEDVIILPTHWCLLVGRQ

Intron Amino Acid Position:

2480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

65.1

40.5

Major BPS

52.5

0.06

1.4

65.3

41.6

Major PPT

66.3

0.37

0.9

62.9

39.5

Minor 5ss

33.5

-1.9

3.2

41.3

40.4

Minor BPS

39.8

-0.9

2.2

46.14

41.3

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866