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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113358543_113366741_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113358543 - 113366741

Intron Length:

8199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTCTGTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTCCCTTTAATT

Flanking Amino Acid:

DSRLRKLTYLVTGADLIQVT

Intron Amino Acid Position:

2418

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

86.2

0.81

0.8

83.9

31.1

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

76.2

0.9

1.1

84.98

35.9

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866