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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113387202_113388447_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113387202 - 113388447

Intron Length:

1246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTGGG

5'SS Class:

major

3'SS Sequence:

CTTTCCTACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAA

U12 Branch Point Sequence:

CTTTCCTACACA

Flanking Amino Acid:

FSENVAHSCTRHGLLVYPEY

Intron Amino Acid Position:

2087

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.3

0.55

1.1

60.1

44.8

Major BPS

62.9

0.32

1.2

65.3

38.6

Major PPT

77.5

0.62

0.8

72.6

31.1

Minor 5ss

31.1

-2.2

3.3

41.2

45.1

Minor BPS

0.28

2.1

74.7

43.3

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866