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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113397736_113399320_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113397736 - 113399320

Intron Length:

1585

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTTGTATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

CTGCCTTGTATT

Flanking Amino Acid:

RECAKAGVARGDSSCLYKRS

Intron Amino Acid Position:

1896

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

0.65

1.1

77.4

37.3

Major PPT

78.6

0.64

0.9

69.4

40.5

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

46.4

-0.2

1.8

61.51

43.1

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866