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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113416064_113428974_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113416064 - 113428974

Intron Length:

12911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGCAGA

5'SS Class:

major

3'SS Sequence:

CTGTTGTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

TTGCATTTTACT

Flanking Amino Acid:

TATLNLLHLQGGKLLFTGPG

Intron Amino Acid Position:

1703

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.3

61.5

44.7

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

79.9

0.67

0.9

37.3

Minor 5ss

40.3

-1.1

2.6

49.5

46.3

Minor BPS

53.1

0.18

1.8

74.47

42.1

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866