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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113429126_113451496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113429126 - 113451496

Intron Length:

22371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAATCA

5'SS Class:

major

3'SS Sequence:

TTCTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

ACAGTTTTGACC

Flanking Amino Acid:

IWKNWGQNTQLALRFCGRWA

Intron Amino Acid Position:

1653

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

66.4

33.3

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

94.1

0.99

0.6

87.9

29.5

Minor 5ss

43.7

-0.7

2.9

57.2

47.1

Minor BPS

51.1

0.02

1.3

55.16

37.6

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866