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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113456348_113463275_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113456348 - 113463275

Intron Length:

6928

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTCAGCTAA

5'SS Class:

major

3'SS Sequence:

CCTGTCCTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGTTAT

U12 Branch Point Sequence:

TTTGGGTTATTT

Flanking Amino Acid:

DLSCLAPRLHASLAILCGLT

Intron Amino Acid Position:

1531

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.4

62.4

40.8

Major BPS

49.3

-0

1.5

43.1

49.2

Major PPT

79.5

0.66

0.8

72.8

Minor 5ss

39.1

-1.2

2.9

48.1

47.4

Minor BPS

44.2

-0.3

2.6

70.91

46.7

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866