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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113463420_113463592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113463420 - 113463592

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

GTCCCTTTCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

TGTGACTTAAAT

Flanking Amino Acid:

LVVTAAYHNWGGLAGGAVHL

Intron Amino Acid Position:

1483

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

72.3

39.5

Major BPS

0.5

1.1

76.9

32.8

Major PPT

64.9

0.34

62.9

37.5

Minor 5ss

34.1

-1.8

2.9

36.4

40.6

Minor BPS

62.2

0.46

1.8

79.4

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866