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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113465204_113467793_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113465204 - 113467793

Intron Length:

2590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

TTTTTCTCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCGTAAT

U12 Branch Point Sequence:

TTTTCTCCCAAG

Flanking Amino Acid:

SIEPCCGSFLGGTLLTISGV

Intron Amino Acid Position:

946

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

67.1

44.6

Major BPS

54.1

0.1

1.4

57.6

45.8

Major PPT

76.4

0.59

32.9

Minor 5ss

39.3

-1.2

2.8

43.9

43.7

Minor BPS

42.4

-0.7

2.3

57.57

43.9

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866