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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113469463_113474245_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113469463 - 113474245

Intron Length:

4783

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAAAAGT

5'SS Class:

major

3'SS Sequence:

TTCTCCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTTTCATCAATT

Flanking Amino Acid:

SLSRNRSGIAGGQELQIGIS

Intron Amino Acid Position:

858

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

0.9

73.9

36.4

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

85.1

0.79

0.7

77.2

31.5

Minor 5ss

29.1

-2.4

40.4

45.3

Minor BPS

63.3

0.5

1.8

82.72

38.2

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866