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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113481105_113482036_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113481105 - 113482036

Intron Length:

932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATATGC

5'SS Class:

major

3'SS Sequence:

ATGTCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATCAT

U12 Branch Point Sequence:

TCATCCCTATGT

Flanking Amino Acid:

RVHLASTVISGVSVHISSHH

Intron Amino Acid Position:

555

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

68.8

37.2

Major BPS

75.6

0.64

1.1

76.2

37.5

Major PPT

82.8

0.74

0.9

77.3

36.3

Minor 5ss

38.4

-1.3

51.4

45.1

Minor BPS

47.7

-0

2.2

69.35

47.1

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866