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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113484998_113486113_R

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

113484998 - 113486113

Intron Length:

1116

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTTTCTTTA

5'SS Class:

weak_minor

3'SS Sequence:

AACTACCCCGCAG|C

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

GTTACTGTAACT

Flanking Amino Acid:

IFRISVSYTNQNRDCTTLLS

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.2

0.05

1.3

61.8

39.1

Major BPS

68.5

0.46

75.3

29.8

Major PPT

63.5

0.3

0.9

55.3

Minor 5ss

64.7

0.5

1.9

72.2

37.8

Minor BPS

60.3

0.4

2.1

81.36

40.2

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866