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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113487259_113489111_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

113487259 - 113489111

Intron Length:

1853

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTAATT

5'SS Class:

major

3'SS Sequence:

TTAGGTACAAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTTAG

U12 Branch Point Sequence:

TTTCTGTTAGGT

Flanking Amino Acid:

ILFRDGFEKEASVTTGHVVS

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.1

77.4

37.4

Major BPS

-0.1

1.6

46.8

46.7

Major PPT

46.1

-0.2

1.7

48.3

43.7

Minor 5ss

38.1

-1.3

3.4

57.7

46.5

Minor BPS

45.9

-0.2

2.4

72.66

44.4

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866