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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113491570_113492425_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113491570 - 113492425

Intron Length:

856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCAGT

5'SS Class:

major

3'SS Sequence:

TGCTTTTGCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTGCACGTTACA

Flanking Amino Acid:

RFLSAAKHSFSSRLRGFFVA

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

65.7

45.6

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

72.5

0.51

0.9

72.7

37.5

Minor 5ss

40.1

-1.1

3.1

58.5

45.6

Minor BPS

44.4

-0.4

2.4

61.88

43.7

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866