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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113492562_113493065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113492562 - 113493065

Intron Length:

504

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGTAT

5'SS Class:

strong_major

3'SS Sequence:

TTTAACTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTATTTTAACT

Flanking Amino Acid:

KGRRLGAPQPGNRGLLFEVW

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

75.8

36.3

Major BPS

89.7

0.98

0.7

89.9

Major PPT

78.6

0.64

0.9

70.3

40.8

Minor 5ss

37.3

-1.4

3.6

55.1

49.1

Minor BPS

80.2

1.03

1.1

92.12

30.1

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866