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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113493162_113493443_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113493162 - 113493443

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTGCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

CAAGCCTGACAT

Flanking Amino Acid:

FEEPVQVTSAGVPCKVKHVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

67.9

0.4

60.8

40.3

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

-0.3

1.9

56.19

45.4

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866