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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113493546_113495456_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113493546 - 113495456

Intron Length:

1911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGATC

5'SS Class:

major

3'SS Sequence:

CCTTCCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

GTTTTCAGATCC

Flanking Amino Acid:

QELFLYQIHSEIASVFPAGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.2

43.2

Major BPS

0.65

1.5

85.7

34.9

Major PPT

82.5

0.73

0.7

76.7

25.3

Minor 5ss

41.3

-1

3.4

60.3

44.4

Minor BPS

47.6

-0.2

1.9

64.93

40.2

Associated Gene:

Gene:

PKHD1

Ensembl Gene ID:

ENSAPLG00000013410

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014007

113257700 - 113495565

237866