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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113579922_113580174_R


Intron Information:

Intron Rank:
14

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
113579922 - 113580174

Intron Length:
253

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGTTATG

5'SS Class:
major

3'SS Sequence:
TTCCCTCACCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTCAC

U12 Branch Point Sequence:
TTTCCCTCACCC

Flanking Amino Acid:
TQPKEEGRKQRKKKARTEGQ

Intron Amino Acid Position:
692

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1.1
74.6
41.7

Major BPS
60.1
0.25
1.1
62.9
34.3

Major PPT
73
0.52
0.8
65.7
35

Minor 5ss
38
-1.4
3.1
50.7
45.8

Minor BPS
61.1
0.33
1.9
76.58
39.5

Associated Gene:

Gene:
MCM3

Ensembl Gene ID:

Chromosome:
3

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

113578605 - 113587859
9255