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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113608817_113609515_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

113608817 - 113609515

Intron Length:

699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGACTT

5'SS Class:

major

3'SS Sequence:

CCCTCTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTATCTCTCACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.3

75.5

40.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

73.9

0.54

0.7

67.7

25.9

Minor 5ss

33.3

-1.9

3.2

48.4

47.1

Minor BPS

56.8

0.29

2.1

81.43

40.1

Associated Gene:

Gene:

EFHC1

Ensembl Gene ID:

ENSAPLG00000012873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013409

113608740 - 113626607

17868