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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113614839_113616324_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

113614839 - 113616324

Intron Length:

1486

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAAAGA

5'SS Class:

major

3'SS Sequence:

TCCCAAACAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCCAAA

U12 Branch Point Sequence:

TTGTCCCAAACA

Flanking Amino Acid:

IPAHVAFDKKILKFDAYFQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.52

1.1

Major BPS

50.1

1.3

58.9

35.8

Major PPT

58.8

0.2

51.8

35.4

Minor 5ss

30.8

-2.2

3.2

40.2

45.5

Minor BPS

59.6

0.3

41.3

Associated Gene:

Gene:

EFHC1

Ensembl Gene ID:

ENSAPLG00000012873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013409

113608740 - 113626607

17868