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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113618456_113619583_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113618456 - 113619583

Intron Length:

1128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCGTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

TAATTCTAACCC

Flanking Amino Acid:

LKQFLTYDKQVLRFYAMWDD

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

73.9

0.54

0.9

65.4

41.1

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

50.1

-0

1.9

63.72

41.8

Associated Gene:

Gene:

EFHC1

Ensembl Gene ID:

ENSAPLG00000012873

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013409

113608740 - 113626607

17868