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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113657852_113659272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113657852 - 113659272

Intron Length:

1421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTATGGTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTTTTTGTATG

Flanking Amino Acid:

LLFVAFHASADFPHPPKHLM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.5

36.8

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

70.7

0.47

1.1

64.7

45.5

Minor 5ss

38.5

-1.3

3.4

55.9

48.3

Minor BPS

49.6

-0.1

1.8

63.05

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001286

113657395 - 113659403

2009