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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113662278_113662794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113662278 - 113662794

Intron Length:

517

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGAGAT

U12 Branch Point Sequence:

CTGTGCTGAGAT

Flanking Amino Acid:

VLLLMLQAAAGLSFPRGSPQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

81.2

26.3

Major BPS

51.7

0.04

1.3

50.1

44.2

Major PPT

72.1

0.5

0.8

66.4

Minor 5ss

38.2

-1.3

3.1

49.9

46.6

Minor BPS

43.9

-0.3

2.1

61.93

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027564

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027767

113662126 - 113680089

17964