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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113683177_113684331_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

113683177 - 113684331

Intron Length:

1155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CCTTTCTTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.7

0.65

0.7

72.6

25.6

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

62.5

0.47

1.6

74.56

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012287

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012782

113683034 - 113685815

2782