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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113690628_113691742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

113690628 - 113691742

Intron Length:

1115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCCTTATAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

TCTTCCTTATAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

29.3

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

81.5

0.71

0.7

76.3

25.9

Minor 5ss

-0.8

2.8

56.6

41.9

Minor BPS

0.27

1.8

68.56

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012251

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034449

113688679 - 113691906

3228

ENSAPLT00000012746

113688679 - 113691906

3228