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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113734483_113735407_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113734483 - 113735407

Intron Length:

925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGC

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTCCCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAT

U12 Branch Point Sequence:

TGCAGCACAACT

Flanking Amino Acid:

VLLFLFQAAPGLGLPKDTLR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

73.9

36.8

Major BPS

65.8

0.39

1.2

57.3

41.7

Major PPT

74.7

0.56

0.8

70.1

30.8

Minor 5ss

29.6

-2.3

3.5

41.1

45.6

Minor BPS

43.6

-0.4

2.2

62.98

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011923

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012406

113734244 - 113736608

2365