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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113758928_113760374_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113758928 - 113760374

Intron Length:

1447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGGACC

5'SS Class:

major

3'SS Sequence:

GGCTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAG

U12 Branch Point Sequence:

AGTTCTGCAGCA

Flanking Amino Acid:

RGEQRERNRGRQGTCCSPGG

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

66.9

38.5

Major BPS

45.4

-0.2

1.8

59.3

47.1

Major PPT

82.8

0.74

0.9

80.2

37.3

Minor 5ss

28.6

-2.5

36.3

40.5

Minor BPS

43.6

-0.4

2.3

58.75

Associated Gene:

Gene:

CTSB

Ensembl Gene ID:

ENSAPLG00000011195

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042739

113758584 - 113768713

10130