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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113762346_113763117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

113762346 - 113763117

Intron Length:

772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTAAC

5'SS Class:

major

3'SS Sequence:

AATCTGGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAA

U12 Branch Point Sequence:

GATTCCCAAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

71.6

33.8

Major BPS

63.1

0.33

1.2

72.7

34.3

Major PPT

66.8

0.38

58.6

42.1

Minor 5ss

32.8

-2

2.7

42.3

38.4

Minor BPS

50.9

0.01

65.23

40.2

Associated Gene:

Gene:

CTSB

Ensembl Gene ID:

ENSAPLG00000011195

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011714

113762199 - 113768143

5945