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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113764525_113765025_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113764525 - 113765025

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCTGC

5'SS Class:

major

3'SS Sequence:

CCTCTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCAGAT

U12 Branch Point Sequence:

CCTCTTTCCACA

Flanking Amino Acid:

LSCCGFECGMGCNGGYPSGA

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

60.1

41.9

Major BPS

61.8

0.29

1.1

58.3

39.2

Major PPT

80.3

0.68

0.7

75.2

Minor 5ss

38.3

-1.3

41.6

45.3

Minor BPS

43.8

-0.4

1.9

51.67

40.8

Associated Gene:

Gene:

CTSB

Ensembl Gene ID:

ENSAPLG00000011195

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042739

113758584 - 113768713

10130

ENSAPLT00000032259

113757559 - 113803699

46141

ENSAPLT00000011714

113762199 - 113768143

5945

ENSAPLT00000044851

113757559 - 113768734

11176