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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113765112_113765731_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113765112 - 113765731

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

CTCATGCCACCT

Flanking Amino Acid:

VSGGLYDSHVGCRPYSIPPC

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

75.3

40.8

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

79.2

0.66

0.8

69.6

36.7

Minor 5ss

36.4

-1.5

2.9

43.6

43.3

Minor BPS

32.9

-1.2

2.3

48.48

44.6

Associated Gene:

Gene:

CTSB

Ensembl Gene ID:

ENSAPLG00000011195

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032259

113757559 - 113803699

46141

ENSAPLT00000011714

113762199 - 113768143

5945

ENSAPLT00000044851

113757559 - 113768734

11176

ENSAPLT00000042739

113758584 - 113768713

10130