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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113765879_113766498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113765879 - 113766498

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

CCCACCTCTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

CTTCTCCCACCT

Flanking Amino Acid:

SPSYKEDKHYGITSYGVPHS

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

66.1

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

0.38

0.8

57.7

33.1

Minor 5ss

31.8

-2.1

3.1

36.6

41.8

Minor BPS

44.1

-0.3

2.1

65.92

44.5

Associated Gene:

Gene:

CTSB

Ensembl Gene ID:

ENSAPLG00000011195

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044851

113757559 - 113768734

11176

ENSAPLT00000042739

113758584 - 113768713

10130

ENSAPLT00000032259

113757559 - 113803699

46141

ENSAPLT00000011714

113762199 - 113768143

5945