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Intron Name: Anas_platyrhynchos_platyrhynchos_3_113786095_113786400_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

113786095 - 113786400

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTCCAT

U12 Branch Point Sequence:

AGATCCGCAGTC

Flanking Amino Acid:

LKSLRLQGAQVHGKNLFLAF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.8

38.1

Major BPS

53.3

0.08

1.4

64.2

Major PPT

84.6

0.78

0.7

83.9

24.3

Minor 5ss

40.1

-1.1

3.1

55.9

48.3

Minor BPS

41.4

-0.6

2.2

50.94

39.8

Associated Gene:

Gene:

NEIL2

Ensembl Gene ID:

ENSAPLG00000011130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011577

113783608 - 113786592

2985